HL_6Z1P_024
3D structure
- PDB id
- 6Z1P (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the mitochondrial ribosome from Tetrahymena thermophila
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.7 Å
Loop
- Sequence
- CUUGGAAGCAG
- Length
- 11 nucleotides
- Bulged bases
- 6Z1P|1|Ab|A|934
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6Z1P_024 not in the Motif Atlas
- Homologous match to HL_6PRV_001
- Geometric discrepancy: 0.1668
- The information below is about HL_6PRV_001
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_20174.1
- Basepair signature
- cWW-F-F-F-F-F-F-F-F
- Number of instances in this motif group
- 5
Unit IDs
6Z1P|1|Ab|C|928
6Z1P|1|Ab|U|929
6Z1P|1|Ab|U|930
6Z1P|1|Ab|G|931
6Z1P|1|Ab|G|932
6Z1P|1|Ab|A|933
6Z1P|1|Ab|A|934
6Z1P|1|Ab|G|935
6Z1P|1|Ab|C|936
6Z1P|1|Ab|A|937
6Z1P|1|Ab|G|938
Current chains
- Chain Ab
- LSU rRNA_2
Nearby chains
- Chain AN
- mL54
- Chain An
- Ribosomal protein L11, amine-terminal domain protein
- Chain Ar
- Ribosomal protein L16
Coloring options: