HL_6Z1P_035

3D structure

PDB id

6Z1P (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the mitochondrial ribosome from Tetrahymena thermophila

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

CUUUGG

Length

6 nucleotides

Bulged bases

6Z1P|1|Ab|U|1455

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6Z1P_035 not in the Motif Atlas

Homologous match to HL_7RQB_042

Geometric discrepancy: 0.1543

The information below is about HL_7RQB_042

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_03562.2

Basepair signature

cWW-tSW-F

Number of instances in this motif group

56

Unit IDs

6Z1P|1|Ab|C|1453
6Z1P|1|Ab|U|1454
6Z1P|1|Ab|U|1455
6Z1P|1|Ab|U|1456
6Z1P|1|Ab|G|1457
6Z1P|1|Ab|G|1458

Current chains

Chain Ab

LSU rRNA_2

Nearby chains

Chain Ac

Ribosomal protein L2

Chain Bb

Small subunit ribosomal RNA; SSU rRNA