HL_6Z1P_052
3D structure
- PDB id
- 6Z1P (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the mitochondrial ribosome from Tetrahymena thermophila
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.7 Å
Loop
- Sequence
- AGUUCUUAU
- Length
- 9 nucleotides
- Bulged bases
- 6Z1P|1|Ab|U|2167
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6Z1P_052 not in the Motif Atlas
- Homologous match to HL_4WF9_056
- Geometric discrepancy: 0.2729
- The information below is about HL_4WF9_056
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_52011.1
- Basepair signature
- cWW-tSH-F-F-F-F-F
- Number of instances in this motif group
- 9
Unit IDs
6Z1P|1|Ab|A|2165
6Z1P|1|Ab|G|2166
6Z1P|1|Ab|U|2167
6Z1P|1|Ab|U|2168
6Z1P|1|Ab|C|2169
6Z1P|1|Ab|U|2170
6Z1P|1|Ab|U|2171
6Z1P|1|Ab|A|2172
6Z1P|1|Ab|U|2173
Current chains
- Chain Ab
- LSU rRNA_2
Nearby chains
- Chain AG
- Ribosomal protein
- Chain AM
- mL53
- Chain AN
- mL54
- Chain Ar
- Ribosomal protein L16
Coloring options: