HL_6Z1P_062

3D structure

PDB id

6Z1P (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the mitochondrial ribosome from Tetrahymena thermophila

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

UUAAAAUUUUA

Length

11 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6Z1P_062 not in the Motif Atlas

Geometric match to HL_8KAH_003

Geometric discrepancy: 0.399

The information below is about HL_8KAH_003

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_89457.1

Basepair signature

cWW-F-F-F

Number of instances in this motif group

2

Unit IDs

6Z1P|1|Ba|U|104
6Z1P|1|Ba|U|105
6Z1P|1|Ba|A|106
6Z1P|1|Ba|A|107
6Z1P|1|Ba|A|108
6Z1P|1|Ba|A|109
6Z1P|1|Ba|U|110
6Z1P|1|Ba|U|111
6Z1P|1|Ba|U|112
6Z1P|1|Ba|U|113
6Z1P|1|Ba|A|114

Current chains

Chain Ba

SSU rRNA_1

Nearby chains

Chain BV

mS90

Chain Bz

mS34