HL_6Z1P_063
3D structure
- PDB id
- 6Z1P (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the mitochondrial ribosome from Tetrahymena thermophila
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.7 Å
Loop
- Sequence
- CUUAAAUAG
- Length
- 9 nucleotides
- Bulged bases
- 6Z1P|1|Ba|U|175
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6Z1P_063 not in the Motif Atlas
- Geometric match to HL_5T83_003
- Geometric discrepancy: 0.3925
- The information below is about HL_5T83_003
- Detailed Annotation
- T-loop related
- Broad Annotation
- T-loop
- Motif group
- HL_61418.2
- Basepair signature
- cWW-F-F-F-F-F-F
- Number of instances in this motif group
- 12
Unit IDs
6Z1P|1|Ba|C|169
6Z1P|1|Ba|U|170
6Z1P|1|Ba|U|171
6Z1P|1|Ba|A|172
6Z1P|1|Ba|A|173
6Z1P|1|Ba|A|174
6Z1P|1|Ba|U|175
6Z1P|1|Ba|A|176
6Z1P|1|Ba|G|177
Current chains
- Chain Ba
- SSU rRNA_1
Nearby chains
- Chain Ad
- 50S ribosomal protein L3
- Chain BV
- mS90
- Chain BY
- mS93
- Chain Bb
- Small subunit ribosomal RNA; SSU rRNA
- Chain Bz
- mS34
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