HL_6Z1P_102
3D structure
- PDB id
- 6Z1P (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the mitochondrial ribosome from Tetrahymena thermophila
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.7 Å
Loop
- Sequence
- CAAACAAG
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6Z1P_102 not in the Motif Atlas
- Homologous match to HL_4WF9_053
- Geometric discrepancy: 0.1899
- The information below is about HL_4WF9_053
- Detailed Annotation
- GNRA with extra cWW
- Broad Annotation
- GNRA with extra cWW
- Motif group
- HL_87268.2
- Basepair signature
- cWW-F-F-F-F-F-F
- Number of instances in this motif group
- 15
Unit IDs
6Z1P|1|Ab|C|2049
6Z1P|1|Ab|A|2050
6Z1P|1|Ab|A|2051
6Z1P|1|Ab|A|2052
6Z1P|1|Ab|C|2053
6Z1P|1|Ab|A|2054
6Z1P|1|Ab|A|2055
6Z1P|1|Ab|G|2056
Current chains
- Chain Ab
- LSU rRNA_2
Nearby chains
- Chain AA
- 50S ribosomal protein L27
- Chain AF
- bL35m
- Chain AL
- Large subunit ribosomal protein
- Chain Aq
- Ribosomal protein L15, putative
Coloring options: