HL_6Z6K_059
3D structure
- PDB id
- 6Z6K (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of yeast reconstituted Lso2 bound to 80S ribosomes
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.4 Å
Loop
- Sequence
- UUCAGUGUG
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6Z6K_059 not in the Motif Atlas
- Homologous match to HL_8C3A_059
- Geometric discrepancy: 0.1095
- The information below is about HL_8C3A_059
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_34636.1
- Basepair signature
- cWW-cWW-F-F-F-F-F
- Number of instances in this motif group
- 3
Unit IDs
6Z6K|1|C1|U|2724
6Z6K|1|C1|U|2725
6Z6K|1|C1|C|2726
6Z6K|1|C1|A|2727
6Z6K|1|C1|G|2728
6Z6K|1|C1|U|2729
6Z6K|1|C1|G|2730
6Z6K|1|C1|U|2731
6Z6K|1|C1|G|2732
Current chains
- Chain C1
- 25S rRNA
Nearby chains
- Chain LQ
- 60S ribosomal protein L18-A
- Chain LT
- 60S ribosomal protein L21-A
- Chain La
- 60S ribosomal protein L28
- Chain Lo
- 60S ribosomal protein L42-A
Coloring options: