HL_6Z6L_002
3D structure
- PDB id
- 6Z6L (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of human CCDC124 bound to 80S ribosomes
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- GCUUUCACC
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6Z6L_002 not in the Motif Atlas
- Homologous match to HL_8VU0_002
- Geometric discrepancy: 0.5832
- The information below is about HL_8VU0_002
- Detailed Annotation
- GNRA
- Broad Annotation
- No text annotation
- Motif group
- HL_37824.8
- Basepair signature
- cWW-F-F-F-F
- Number of instances in this motif group
- 352
Unit IDs
6Z6L|1|CC|G|31
6Z6L|1|CC|C|32
6Z6L|1|CC|U|33
6Z6L|1|CC|U|34
6Z6L|1|CC|U|35
6Z6L|1|CC|C|36
6Z6L|1|CC|A|37
6Z6L|1|CC|C|38
6Z6L|1|CC|C|39
Current chains
- Chain CC
- tRNA
Nearby chains
- Chain CE
- Coiled-coil domain-containing protein 124
- Chain S2
- Small subunit ribosomal RNA; SSU rRNA
- Chain SF
- 40S ribosomal protein S5
- Chain SO
- 40S ribosomal protein S14
- Chain Sc
- 40S ribosomal protein S28
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