3D structure

PDB id
8VU0 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Co-crystal structure of Aquifex aeolicus Trbp111 in complex with E. coli tRNA-Ile
Experimental method
X-RAY DIFFRACTION
Resolution
2.64 Å

Loop

Sequence
CGAAAG
Length
6 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
HL_85603.1
Basepair signature
cWW-tSH-F-F
Number of instances in this motif group
304

Unit IDs

8VU0|1|C|C|33
8VU0|1|C|G|34
8VU0|1|C|A|35
8VU0|1|C|A|36
8VU0|1|C|A|37
8VU0|1|C|G|38

Current chains

Chain C
RNA (76-MER)

Nearby chains

No other chains within 10Å

Coloring options:

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