HL_6ZCE_037

3D structure

PDB id

6ZCE (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of a yeast ABCE1-bound 43S pre-initiation complex

Experimental method

ELECTRON MICROSCOPY

Resolution

5.3 Å

Loop

Sequence

CAUUGUAAUUAUUG

Length

14 nucleotides

Bulged bases

6ZCE|1|A|U|1557, 6ZCE|1|A|U|1558, 6ZCE|1|A|A|1559

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6ZCE|1|A|C|1549
6ZCE|1|A|A|1550
6ZCE|1|A|U|1551
6ZCE|1|A|U|1552
6ZCE|1|A|G|1553
6ZCE|1|A|U|1554
6ZCE|1|A|A|1555
6ZCE|1|A|A|1556
6ZCE|1|A|U|1557
6ZCE|1|A|U|1558
6ZCE|1|A|A|1559
6ZCE|1|A|U|1560
6ZCE|1|A|U|1561
6ZCE|1|A|G|1562

Current chains

Chain A

18S ribosomal RNA (1719-MER)

Nearby chains

Chain Q

40S ribosomal protein S15

Chain T

40S ribosomal protein S18-A

Chain U

40S ribosomal protein S19-A

Chain e

40S ribosomal protein S29-A