HL_6ZJ3_110
3D structure
- PDB id
- 6ZJ3 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the highly atypical cytoplasmic ribosome of Euglena gracilis
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.15 Å
Loop
- Sequence
- GUUGCAACUGUC
- Length
- 12 nucleotides
- Bulged bases
- 6ZJ3|1|S1|G|2062
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6ZJ3_110 not in the Motif Atlas
- Homologous match to HL_4V88_219
- Geometric discrepancy: 0.1062
- The information below is about HL_4V88_219
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_03273.1
- Basepair signature
- cWW-F-F-tWH-F-F-F
- Number of instances in this motif group
- 3
Unit IDs
6ZJ3|1|S1|G|2053
6ZJ3|1|S1|U|2054
6ZJ3|1|S1|U|2055
6ZJ3|1|S1|G|2056
6ZJ3|1|S1|C|2057
6ZJ3|1|S1|A|2058
6ZJ3|1|S1|A|2059
6ZJ3|1|S1|C|2060
6ZJ3|1|S1|U|2061
6ZJ3|1|S1|G|2062
6ZJ3|1|S1|U|2063
6ZJ3|1|S1|C|2064
Current chains
- Chain S1
- 18S rRNA
Nearby chains
- Chain SR
- Ribosomal protein uS13
- Chain SS
- Ribosomal protein uS14
- Chain SW
- Ribosomal protein uS19
- Chain SX
- Ribosomal protein eS19
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