HL_6ZM5_022

3D structure

PDB id

6ZM5 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human mitochondrial ribosome in complex with OXA1L, mRNA, A/A tRNA, P/P tRNA and nascent polypeptide

Experimental method

ELECTRON MICROSCOPY

Resolution

2.89 Å

Loop

Sequence

AGCAUCACCAGUAUU

Length

15 nucleotides

Bulged bases

6ZM5|1|A|A|2521, 6ZM5|1|A|U|2522, 6ZM5|1|A|C|2523, 6ZM5|1|A|A|2527, 6ZM5|1|A|U|2531

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6ZM5|1|A|A|2518
6ZM5|1|A|G|2519
6ZM5|1|A|C|2520
6ZM5|1|A|A|2521
6ZM5|1|A|U|2522
6ZM5|1|A|C|2523
6ZM5|1|A|A|2524
6ZM5|1|A|C|2525
6ZM5|1|A|C|2526
6ZM5|1|A|A|2527
6ZM5|1|A|G|2528
6ZM5|1|A|U|2529
6ZM5|1|A|A|2530
6ZM5|1|A|U|2531
6ZM5|1|A|U|2532

Current chains

Chain A

16S mitochondrial rRNA

Nearby chains

Chain 5

39S ribosomal protein L37, mitochondrial

Chain AA

Small subunit ribosomal RNA; SSU rRNA

Chain D

39S ribosomal protein L2, mitochondrial