3D structure

PDB id
6ZM5 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Human mitochondrial ribosome in complex with OXA1L, mRNA, A/A tRNA, P/P tRNA and nascent polypeptide
Experimental method
ELECTRON MICROSCOPY
Resolution
2.89 Å

Loop

Sequence
GCAGAACCCAACC
Length
13 nucleotides
Bulged bases
6ZM5|1|A|G|2831, 6ZM5|1|A|A|2832, 6ZM5|1|A|C|2839
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

6ZM5|1|A|G|2828
6ZM5|1|A|C|2829
6ZM5|1|A|A|2830
6ZM5|1|A|G|2831
6ZM5|1|A|A|2832
6ZM5|1|A|A|2833
6ZM5|1|A|C|2834
6ZM5|1|A|C|2835
6ZM5|1|A|C|2836
6ZM5|1|A|A|2837
6ZM5|1|A|A|2838
6ZM5|1|A|C|2839
6ZM5|1|A|C|2840

Current chains

Chain A
16S mitochondrial rRNA

Nearby chains

Chain 6
39S ribosomal protein L38, mitochondrial
Chain N
39S ribosomal protein L16, mitochondrial
Chain W
39S ribosomal protein L27, mitochondrial
Chain Z
39S ribosomal protein L30, mitochondrial
Chain f
39S ribosomal protein L48, mitochondrial

Coloring options:

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