HL_6ZM5_033

3D structure

PDB id

6ZM5 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human mitochondrial ribosome in complex with OXA1L, mRNA, A/A tRNA, P/P tRNA and nascent polypeptide

Experimental method

ELECTRON MICROSCOPY

Resolution

2.89 Å

Loop

Sequence

UUGUUCA

Length

7 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6ZM5_033 not in the Motif Atlas

Homologous match to HL_4WF9_058

Geometric discrepancy: 0.1311

The information below is about HL_4WF9_058

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_48677.1

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

22

Unit IDs

6ZM5|1|A|U|3038
6ZM5|1|A|U|3039
6ZM5|1|A|G|3040
6ZM5|1|A|U|3041
6ZM5|1|A|U|3042
6ZM5|1|A|C|3043
6ZM5|1|A|A|3044

Current chains

Chain A

16S mitochondrial rRNA

Nearby chains

Chain w

Transfer RNA; tRNA