HL_6ZM5_062

3D structure

PDB id

6ZM5 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human mitochondrial ribosome in complex with OXA1L, mRNA, A/A tRNA, P/P tRNA and nascent polypeptide

Experimental method

ELECTRON MICROSCOPY

Resolution

2.89 Å

Loop

Sequence

ACUUAACU

Length

8 nucleotides

Bulged bases

6ZM5|1|B|C|1652

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6ZM5_062 not in the Motif Atlas

Geometric match to HL_5TBW_076

Geometric discrepancy: 0.2987

The information below is about HL_5TBW_076

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_45177.3

Basepair signature

cWW-F-F-F

Number of instances in this motif group

3

Unit IDs

6ZM5|1|B|A|1651
6ZM5|1|B|C|1652
6ZM5|1|B|U|1653
6ZM5|1|B|U|1654
6ZM5|1|B|A|1655
6ZM5|1|B|A|1656
6ZM5|1|B|C|1657
6ZM5|1|B|U|1658

Current chains

Chain B

mitochondrial tRNAVal

Nearby chains

Chain 6

39S ribosomal protein L38, mitochondrial