HL_6ZM5_067
3D structure
- PDB id
- 6ZM5 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human mitochondrial ribosome in complex with OXA1L, mRNA, A/A tRNA, P/P tRNA and nascent polypeptide
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.89 Å
Loop
- Sequence
- ACUUUCAAU
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6ZM5_067 not in the Motif Atlas
- Homologous match to HL_4TUE_034
- Geometric discrepancy: 0.0895
- The information below is about HL_4TUE_034
- Detailed Annotation
- tRNA anticodon loop
- Broad Annotation
- Anticodon loop
- Motif group
- HL_06059.7
- Basepair signature
- cWW-F-F-F-F-F-F-F
- Number of instances in this motif group
- 51
Unit IDs
6ZM5|1|x|A|31
6ZM5|1|x|C|32
6ZM5|1|x|U|33
6ZM5|1|x|U|34
6ZM5|1|x|U|35
6ZM5|1|x|C|36
6ZM5|1|x|A|37
6ZM5|1|x|A|38
6ZM5|1|x|U|39
Current chains
- Chain x
- P-site tRNA
Nearby chains
- Chain 8
- 39S ribosomal protein L40, mitochondrial
- Chain AA
- Small subunit ribosomal RNA; SSU rRNA
- Chain AG
- 28S ribosomal protein S9, mitochondrial
- Chain y
- mRNA
Coloring options: