HL_6ZM6_014

3D structure

PDB id

6ZM6 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human mitochondrial ribosome in complex with mRNA, A/A tRNA and P/P tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

2.59 Å

Loop

Sequence

CCUAAAAGCAG

Length

11 nucleotides

Bulged bases

6ZM6|1|A|A|2181

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6ZM6_014 not in the Motif Atlas

Homologous match to HL_6PRV_001

Geometric discrepancy: 0.12

The information below is about HL_6PRV_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_20174.1

Basepair signature

cWW-F-F-F-F-F-F-F-F

Number of instances in this motif group

5

Unit IDs

6ZM6|1|A|C|2175
6ZM6|1|A|C|2176
6ZM6|1|A|U|2177
6ZM6|1|A|A|2178
6ZM6|1|A|A|2179
6ZM6|1|A|A|2180
6ZM6|1|A|A|2181
6ZM6|1|A|G|2182
6ZM6|1|A|C|2183
6ZM6|1|A|A|2184
6ZM6|1|A|G|2185

Current chains

Chain A

16S mitochondrial rRNA

Nearby chains

Chain J

39S ribosomal protein L11, mitochondrial

Chain N

39S ribosomal protein L16, mitochondrial

Chain l

39S ribosomal protein L54, mitochondrial