HL_6ZQB_007

3D structure

PDB id

6ZQB (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the 90S pre-ribosome from Saccharomyces cerevisiae, state B2

Experimental method

ELECTRON MICROSCOPY

Resolution

3.9 Å

Loop

Sequence

GUGAAACACC

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6ZQB|1|D2|G|424
6ZQB|1|D2|U|425
6ZQB|1|D2|G|426
6ZQB|1|D2|A|427
6ZQB|1|D2|A|428
6ZQB|1|D2|A|429
6ZQB|1|D2|C|430
6ZQB|1|D2|A|431
6ZQB|1|D2|C|432
6ZQB|1|D2|C|433

Current chains

Chain D2

5ETS RNA

Nearby chains

Chain CB

rRNA 2'-O-methyltransferase fibrillarin

Chain UK

U3 small nucleolar RNA-associated protein 11