HL_6ZQB_023

3D structure

PDB id

6ZQB (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the 90S pre-ribosome from Saccharomyces cerevisiae, state B2

Experimental method

ELECTRON MICROSCOPY

Resolution

3.9 Å

Loop

Sequence

GCCGGUCGGAUUUC

Length

14 nucleotides

Bulged bases

None detected

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6ZQB|1|D3|G|652
6ZQB|1|D3|C|653
6ZQB|1|D3|C|654
6ZQB|1|D3|G|655
6ZQB|1|D3|G|656
6ZQB|1|D3|U|657
6ZQB|1|D3|C|658
6ZQB|1|D3|G|676
6ZQB|1|D3|G|677
6ZQB|1|D3|A|678
6ZQB|1|D3|U|679
6ZQB|1|D3|U|680
6ZQB|1|D3|U|681
6ZQB|1|D3|C|682

Current chains

Chain D3

18S rRNA

Nearby chains

Chain UT

U3 small nucleolar RNA-associated protein 20