HL_6ZS9_013

3D structure

PDB id

6ZS9 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human mitochondrial ribosome in complex with ribosome recycling factor

Experimental method

ELECTRON MICROSCOPY

Resolution

4 Å

Loop

Sequence

GAUAAACCCC

Length

10 nucleotides

Bulged bases

6ZS9|1|AA|C|1225

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6ZS9_013 not in the Motif Atlas

Homologous match to HL_5J7L_021

Geometric discrepancy: 0.5058

The information below is about HL_5J7L_021

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_50779.4

Basepair signature

cWW-F-F-F-F-F-F-F

Number of instances in this motif group

4

Unit IDs

6ZS9|1|AA|G|1217
6ZS9|1|AA|A|1218
6ZS9|1|AA|U|1219
6ZS9|1|AA|A|1220
6ZS9|1|AA|A|1221
6ZS9|1|AA|A|1222
6ZS9|1|AA|C|1223
6ZS9|1|AA|C|1224
6ZS9|1|AA|C|1225
6ZS9|1|AA|C|1226

Current chains

Chain AA

12S rRNA

Nearby chains

Chain AG

28S ribosomal protein S9, mitochondrial

Chain AH

28S ribosomal protein S10, mitochondrial