HL_6ZS9_037

3D structure

PDB id

6ZS9 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human mitochondrial ribosome in complex with ribosome recycling factor

Experimental method

ELECTRON MICROSCOPY

Resolution

4 Å

Loop

Sequence

AAACAU

Length

6 nucleotides

Bulged bases

6ZS9|1|XA|A|2321

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6ZS9_037 not in the Motif Atlas

Geometric match to HL_4U7U_001

Geometric discrepancy: 0.3056

The information below is about HL_4U7U_001

Detailed Annotation

UNCG

Broad Annotation

No text annotation

Motif group

HL_61337.1

Basepair signature

cWW-tSW-F

Number of instances in this motif group

49

Unit IDs

6ZS9|1|XA|A|2319
6ZS9|1|XA|A|2320
6ZS9|1|XA|A|2321
6ZS9|1|XA|C|2322
6ZS9|1|XA|A|2323
6ZS9|1|XA|U|2324

Current chains

Chain XA

16S rRNA

Nearby chains

Chain 0

39S ribosomal protein L32, mitochondrial

Chain XO

39S ribosomal protein L17, mitochondrial

Chain s

39S ribosomal protein S30, mitochondrial