HL_6ZS9_053

3D structure

PDB id

6ZS9 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human mitochondrial ribosome in complex with ribosome recycling factor

Experimental method

ELECTRON MICROSCOPY

Resolution

4 Å

Loop

Sequence

UGCAGCCG

Length

8 nucleotides

Bulged bases

6ZS9|1|XA|G|3016

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6ZS9_053 not in the Motif Atlas

Homologous match to HL_4WF9_057

Geometric discrepancy: 0.1981

The information below is about HL_4WF9_057

Detailed Annotation

GNRA variation

Broad Annotation

GNRA variation

Motif group

HL_46665.1

Basepair signature

cWW-F-F-F-F-F

Number of instances in this motif group

15

Unit IDs

6ZS9|1|XA|U|3015
6ZS9|1|XA|G|3016
6ZS9|1|XA|C|3017
6ZS9|1|XA|A|3018
6ZS9|1|XA|G|3019
6ZS9|1|XA|C|3020
6ZS9|1|XA|C|3021
6ZS9|1|XA|G|3022

Current chains

Chain XA

16S rRNA

Nearby chains

Chain 4

39S ribosomal protein L36, mitochondrial