HL_6ZS9_054

3D structure

PDB id

6ZS9 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human mitochondrial ribosome in complex with ribosome recycling factor

Experimental method

ELECTRON MICROSCOPY

Resolution

4 Å

Loop

Sequence

UUUGUUCAA

Length

9 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6ZS9_054 not in the Motif Atlas

Geometric match to HL_8C3A_022

Geometric discrepancy: 0.3558

The information below is about HL_8C3A_022

Detailed Annotation

Externally structured

Broad Annotation

Externally structured

Motif group

HL_96426.1

Basepair signature

cWW-F

Number of instances in this motif group

4

Unit IDs

6ZS9|1|XA|U|3037
6ZS9|1|XA|U|3038
6ZS9|1|XA|U|3039
6ZS9|1|XA|G|3040
6ZS9|1|XA|U|3041
6ZS9|1|XA|U|3042
6ZS9|1|XA|C|3043
6ZS9|1|XA|A|3044
6ZS9|1|XA|A|3045

Current chains

Chain XA

16S rRNA

Nearby chains

Chain A5

Ribosome-recycling factor, mitochondrial

Chain XL

39S ribosomal protein L14, mitochondrial