HL_6ZSA_011

3D structure

PDB id

6ZSA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human mitochondrial ribosome bound to mRNA, A-site tRNA and P-site tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

4 Å

Loop

Sequence

UCAACAAA

Length

8 nucleotides

Bulged bases

6ZSA|1|AA|C|1120, 6ZSA|1|AA|A|1125

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6ZSA_011 not in the Motif Atlas

Geometric match to HL_2Y8W_001

Geometric discrepancy: 0.3399

The information below is about HL_2Y8W_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_40612.1

Basepair signature

cWW

Number of instances in this motif group

3

Unit IDs

6ZSA|1|AA|U|1115
6ZSA|1|AA|C|1120
6ZSA|1|AA|A|1121
6ZSA|1|AA|A|1122
6ZSA|1|AA|C|1123
6ZSA|1|AA|A|1124
6ZSA|1|AA|A|1125
6ZSA|1|AA|A|1126

Current chains

Chain AA

12S rRNA

Nearby chains

Chain A2

Coiled-coil-helix-coiled-coil-helix domain-containing protein 1

Chain AB

28S ribosomal protein S2, mitochondrial

Chain AD

28S ribosomal protein S5, mitochondrial

Chain AE

28S ribosomal protein S6, mitochondrial

Chain AS

28S ribosomal protein S23, mitochondrial