3D structure

PDB id
6ZSA (explore in PDB, NAKB, or RNA 3D Hub)
Description
Human mitochondrial ribosome bound to mRNA, A-site tRNA and P-site tRNA
Experimental method
ELECTRON MICROSCOPY
Resolution
4 Å

Loop

Sequence
GACUAACCC
Length
9 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_6ZSA_024 not in the Motif Atlas
Homologous match to HL_7RQB_017
Geometric discrepancy: 0.409
The information below is about HL_7RQB_017
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

6ZSA|1|XA|G|1831
6ZSA|1|XA|A|1832
6ZSA|1|XA|C|1833
6ZSA|1|XA|U|1834
6ZSA|1|XA|A|1835
6ZSA|1|XA|A|1836
6ZSA|1|XA|C|1837
6ZSA|1|XA|C|1838
6ZSA|1|XA|C|1839

Current chains

Chain XA
16S rRNA

Nearby chains

Chain XK
39S ribosomal protein L13, mitochondrial
Chain XR
39S ribosomal protein L20, mitochondrial
Chain XS
39S ribosomal protein L21, mitochondrial
Chain XT
39S ribosomal protein L22, mitochondrial
Chain a
39S ribosomal protein L42, mitochondrial
Chain b
39S ribosomal protein L43, mitochondrial

Coloring options:


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