HL_6ZSA_027

3D structure

PDB id

6ZSA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human mitochondrial ribosome bound to mRNA, A-site tRNA and P-site tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

4 Å

Loop

Sequence

UAAAAGA

Length

7 nucleotides

Bulged bases

6ZSA|1|XA|G|1939

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6ZSA_027 not in the Motif Atlas

Geometric match to HL_1F1T_001

Geometric discrepancy: 0.3827

The information below is about HL_1F1T_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_59843.1

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

2

Unit IDs

6ZSA|1|XA|U|1934
6ZSA|1|XA|A|1935
6ZSA|1|XA|A|1936
6ZSA|1|XA|A|1937
6ZSA|1|XA|A|1938
6ZSA|1|XA|G|1939
6ZSA|1|XA|A|1940

Current chains

Chain XA

16S rRNA

Nearby chains

Chain 5

39S ribosomal protein L37, mitochondrial

Chain A3

Aurora kinase A-interacting protein

Chain XD

39S ribosomal protein L2, mitochondrial