HL_6ZSA_030

3D structure

PDB id

6ZSA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human mitochondrial ribosome bound to mRNA, A-site tRNA and P-site tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

4 Å

Loop

Sequence

UCUUAG

Length

6 nucleotides

Bulged bases

6ZSA|1|XA|C|2036, 6ZSA|1|XA|U|2038, 6ZSA|1|XA|A|2039

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6ZSA_030 not in the Motif Atlas

Homologous match to HL_7A0S_024

Geometric discrepancy: 0.2967

The information below is about HL_7A0S_024

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_27530.1

Basepair signature

cWW-F-F

Number of instances in this motif group

10

Unit IDs

6ZSA|1|XA|U|2035
6ZSA|1|XA|C|2036
6ZSA|1|XA|U|2037
6ZSA|1|XA|U|2038
6ZSA|1|XA|A|2039
6ZSA|1|XA|G|2040

Current chains

Chain XA

16S rRNA

Nearby chains

Chain XM

39S ribosomal protein L15, mitochondrial