HL_6ZSA_048

3D structure

PDB id

6ZSA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human mitochondrial ribosome bound to mRNA, A-site tRNA and P-site tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

4 Å

Loop

Sequence

UUGGGGCGA

Length

9 nucleotides

Bulged bases

6ZSA|1|XA|G|2814

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6ZSA_048 not in the Motif Atlas

Homologous match to HL_4WF9_049

Geometric discrepancy: 0.1049

The information below is about HL_4WF9_049

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_11974.2

Basepair signature

cWW-F-F-F-F-F-F

Number of instances in this motif group

17

Unit IDs

6ZSA|1|XA|U|2812
6ZSA|1|XA|U|2813
6ZSA|1|XA|G|2814
6ZSA|1|XA|G|2815
6ZSA|1|XA|G|2816
6ZSA|1|XA|G|2817
6ZSA|1|XA|C|2818
6ZSA|1|XA|G|2819
6ZSA|1|XA|A|2820

Current chains

Chain XA

16S rRNA

Nearby chains

Chain XN

39S ribosomal protein L16, mitochondrial

Chain XW

39S ribosomal protein L27, mitochondrial