HL_6ZSA_053

3D structure

PDB id

6ZSA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human mitochondrial ribosome bound to mRNA, A-site tRNA and P-site tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

4 Å

Loop

Sequence

UGCAGCCG

Length

8 nucleotides

Bulged bases

6ZSA|1|XA|G|3016

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6ZSA_053 not in the Motif Atlas

Homologous match to HL_4WF9_057

Geometric discrepancy: 0.1926

The information below is about HL_4WF9_057

Detailed Annotation

GNRA variation

Broad Annotation

GNRA variation

Motif group

HL_46665.2

Basepair signature

cWW-F-F-F-F-F

Number of instances in this motif group

11

Unit IDs

6ZSA|1|XA|U|3015
6ZSA|1|XA|G|3016
6ZSA|1|XA|C|3017
6ZSA|1|XA|A|3018
6ZSA|1|XA|G|3019
6ZSA|1|XA|C|3020
6ZSA|1|XA|C|3021
6ZSA|1|XA|G|3022

Current chains

Chain XA

16S rRNA

Nearby chains

Chain 4

39S ribosomal protein L36, mitochondrial