HL_6ZSC_001

3D structure

PDB id

6ZSC (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human mitochondrial ribosome in complex with E-site tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

UUUGGUCCUAG

Length

11 nucleotides

Bulged bases

6ZSC|1|AA|U|656

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6ZSC_001 not in the Motif Atlas

Homologous match to HL_4LFB_001

Geometric discrepancy: 0.1829

The information below is about HL_4LFB_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_73535.1

Basepair signature

cWW-tHW-F-F-F-F-F-F-F

Number of instances in this motif group

5

Unit IDs

6ZSC|1|AA|U|654
6ZSC|1|AA|U|655
6ZSC|1|AA|U|656
6ZSC|1|AA|G|657
6ZSC|1|AA|G|658
6ZSC|1|AA|U|659
6ZSC|1|AA|C|660
6ZSC|1|AA|C|661
6ZSC|1|AA|U|662
6ZSC|1|AA|A|663
6ZSC|1|AA|G|664

Current chains

Chain AA

12S rRNA

Nearby chains

Chain AD

28S ribosomal protein S5, mitochondrial