HL_6ZSC_013

3D structure

PDB id

6ZSC (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human mitochondrial ribosome in complex with E-site tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

GAUAAACCCC

Length

10 nucleotides

Bulged bases

6ZSC|1|AA|C|1225

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6ZSC_013 not in the Motif Atlas

Homologous match to HL_5J7L_021

Geometric discrepancy: 0.4978

The information below is about HL_5J7L_021

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_50779.4

Basepair signature

cWW-F-F-F-F-F-F-F

Number of instances in this motif group

4

Unit IDs

6ZSC|1|AA|G|1217
6ZSC|1|AA|A|1218
6ZSC|1|AA|U|1219
6ZSC|1|AA|A|1220
6ZSC|1|AA|A|1221
6ZSC|1|AA|A|1222
6ZSC|1|AA|C|1223
6ZSC|1|AA|C|1224
6ZSC|1|AA|C|1225
6ZSC|1|AA|C|1226

Current chains

Chain AA

12S rRNA

Nearby chains

Chain AG

28S ribosomal protein S9, mitochondrial

Chain AH

28S ribosomal protein S10, mitochondrial