HL_6ZSC_019

3D structure

PDB id

6ZSC (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human mitochondrial ribosome in complex with E-site tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

UAACUAA

Length

7 nucleotides

Bulged bases

6ZSC|1|AA|C|1525, 6ZSC|1|AA|U|1526

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6ZSC_019 not in the Motif Atlas

Geometric match to HL_5TBW_075

Geometric discrepancy: 0.2843

The information below is about HL_5TBW_075

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_22523.2

Basepair signature

cWW-F-F-F

Number of instances in this motif group

13

Unit IDs

6ZSC|1|AA|U|1522
6ZSC|1|AA|A|1523
6ZSC|1|AA|A|1524
6ZSC|1|AA|C|1525
6ZSC|1|AA|U|1526
6ZSC|1|AA|A|1527
6ZSC|1|AA|A|1528

Current chains

Chain AA

12S rRNA

Nearby chains

Chain A0

28S ribosomal protein S34, mitochondrial

Chain AV

28S ribosomal protein S27, mitochondrial