HL_6ZSC_044

3D structure

PDB id

6ZSC (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human mitochondrial ribosome in complex with E-site tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

GUACCCUAAC

Length

10 nucleotides

Bulged bases

6ZSC|1|XA|C|2579

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6ZSC_044 not in the Motif Atlas

Geometric match to HL_8C3A_022

Geometric discrepancy: 0.243

The information below is about HL_8C3A_022

Detailed Annotation

Externally structured

Broad Annotation

Externally structured

Motif group

HL_96426.1

Basepair signature

cWW-F

Number of instances in this motif group

4

Unit IDs

6ZSC|1|XA|G|2574
6ZSC|1|XA|U|2575
6ZSC|1|XA|A|2576
6ZSC|1|XA|C|2577
6ZSC|1|XA|C|2578
6ZSC|1|XA|C|2579
6ZSC|1|XA|U|2580
6ZSC|1|XA|A|2581
6ZSC|1|XA|A|2582
6ZSC|1|XA|C|2583

Current chains

Chain XA

16S rRNA

Nearby chains

Chain AA

Small subunit ribosomal RNA; SSU rRNA