HL_6ZSC_056

3D structure

PDB id

6ZSC (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human mitochondrial ribosome in complex with E-site tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

CGAAAG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6ZSC_056 not in the Motif Atlas

Geometric match to HL_5J7L_179

Geometric discrepancy: 0.162

The information below is about HL_5J7L_179

Detailed Annotation

GNRA related

Broad Annotation

GNRA related

Motif group

HL_04783.2

Basepair signature

cWW-F-F-F

Number of instances in this motif group

9

Unit IDs

6ZSC|1|XA|C|3126
6ZSC|1|XA|G|3127
6ZSC|1|XA|A|3128
6ZSC|1|XA|A|3129
6ZSC|1|XA|A|3130
6ZSC|1|XA|G|3131

Current chains

Chain XA

16S rRNA

Nearby chains