HL_6ZSD_008

3D structure

PDB id

6ZSD (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human mitochondrial ribosome in complex with mRNA, P-site tRNA and E-site tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

UUGUAAAAAA

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6ZSD_008 not in the Motif Atlas

Geometric match to HL_4LFB_015

Geometric discrepancy: 0.2737

The information below is about HL_4LFB_015

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_38491.3

Basepair signature

cWW-F-F-F-F-F-F-F-F

Number of instances in this motif group

14

Unit IDs

6ZSD|1|AA|U|989
6ZSD|1|AA|U|990
6ZSD|1|AA|G|991
6ZSD|1|AA|U|992
6ZSD|1|AA|A|993
6ZSD|1|AA|A|994
6ZSD|1|AA|A|995
6ZSD|1|AA|A|996
6ZSD|1|AA|A|997
6ZSD|1|AA|A|998

Current chains

Chain AA

12SrRNA

Nearby chains

Chain AF

28S ribosomal protein S7, mitochondrial

Chain AI

28S ribosomal protein S11, mitochondrial

Chain AQ

MRPS21 isoform 1