HL_6ZSD_061
3D structure
- PDB id
- 6ZSD (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human mitochondrial ribosome in complex with mRNA, P-site tRNA and E-site tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.7 Å
Loop
- Sequence
- AACUUACACUU
- Length
- 11 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6ZSD_061 not in the Motif Atlas
- Geometric match to HL_7K16_002
- Geometric discrepancy: 0.322
- The information below is about HL_7K16_002
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_14063.2
- Basepair signature
- cWW-F-F-F-F-F-F-F-F-F
- Number of instances in this motif group
- 6
Unit IDs
6ZSD|1|XB|A|1629
6ZSD|1|XB|A|1630
6ZSD|1|XB|C|1631
6ZSD|1|XB|U|1632
6ZSD|1|XB|U|1633
6ZSD|1|XB|A|1634
6ZSD|1|XB|C|1635
6ZSD|1|XB|A|1636
6ZSD|1|XB|C|1637
6ZSD|1|XB|U|1638
6ZSD|1|XB|U|1639
Current chains
- Chain XB
- mt-tRNAVal
Nearby chains
- Chain 6
- 39S ribosomal protein L38, mitochondrial
- Chain 8
- 39S ribosomal protein L40, mitochondrial
- Chain XP
- Mitochondrial ribosomal protein L18, isoform CRA_b
- Chain XW
- 39S ribosomal protein L27, mitochondrial
- Chain e
- 39S ribosomal protein L46, mitochondrial
- Chain f
- 39S ribosomal protein L48, mitochondrial
- Chain m
- 39S ribosomal protein L55, mitochondrial
Coloring options: