HL_6ZSE_011
3D structure
- PDB id
- 6ZSE (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human mitochondrial ribosome in complex with mRNA, A/P-tRNA and P/E-tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 5 Å
Loop
- Sequence
- UCAACAAA
- Length
- 8 nucleotides
- Bulged bases
- 6ZSE|1|AA|C|1120, 6ZSE|1|AA|A|1125
- QA status
- Missing nucleotides
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6ZSE_011 not in the Motif Atlas
- Geometric match to HL_2Y8W_001
- Geometric discrepancy: 0.3242
- The information below is about HL_2Y8W_001
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_40612.1
- Basepair signature
- cWW
- Number of instances in this motif group
- 3
Unit IDs
6ZSE|1|AA|U|1115
6ZSE|1|AA|C|1120
6ZSE|1|AA|A|1121
6ZSE|1|AA|A|1122
6ZSE|1|AA|C|1123
6ZSE|1|AA|A|1124
6ZSE|1|AA|A|1125
6ZSE|1|AA|A|1126
Current chains
- Chain AA
- 12S rRNA
Nearby chains
- Chain A2
- Coiled-coil-helix-coiled-coil-helix domain-containing protein 1
- Chain AB
- 28S ribosomal protein S2, mitochondrial
- Chain AD
- 28S ribosomal protein S5, mitochondrial
- Chain AE
- 28S ribosomal protein S6, mitochondrial
- Chain AS
- 28S ribosomal protein S23, mitochondrial
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