HL_6ZSE_029

3D structure

PDB id

6ZSE (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human mitochondrial ribosome in complex with mRNA, A/P-tRNA and P/E-tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

5 Å

Loop

Sequence

GCGACAAAC

Length

9 nucleotides

Bulged bases

6ZSE|1|XA|A|1991, 6ZSE|1|XA|A|1994

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6ZSE_029 not in the Motif Atlas

Geometric match to HL_5TBW_021

Geometric discrepancy: 0.2595

The information below is about HL_5TBW_021

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_56443.1

Basepair signature

cWW-F-F-F-F-F

Number of instances in this motif group

7

Unit IDs

6ZSE|1|XA|G|1988
6ZSE|1|XA|C|1989
6ZSE|1|XA|G|1990
6ZSE|1|XA|A|1991
6ZSE|1|XA|C|1992
6ZSE|1|XA|A|1993
6ZSE|1|XA|A|1994
6ZSE|1|XA|A|1995
6ZSE|1|XA|C|1996

Current chains

Chain XA

16S rRNA

Nearby chains

Chain 2

39S ribosomal protein L34, mitochondrial

Chain XD

39S ribosomal protein L2, mitochondrial