HL_6ZSE_045

3D structure

PDB id

6ZSE (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human mitochondrial ribosome in complex with mRNA, A/P-tRNA and P/E-tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

5 Å

Loop

Sequence

CUUAAAUAG

Length

9 nucleotides

Bulged bases

6ZSE|1|XA|U|2618

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6ZSE_045 not in the Motif Atlas

Homologous match to HL_7A0S_048

Geometric discrepancy: 0.2225

The information below is about HL_7A0S_048

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_33350.1

Basepair signature

cWW-F-F-F-F-F-F

Number of instances in this motif group

6

Unit IDs

6ZSE|1|XA|C|2612
6ZSE|1|XA|U|2613
6ZSE|1|XA|U|2614
6ZSE|1|XA|A|2615
6ZSE|1|XA|A|2616
6ZSE|1|XA|A|2617
6ZSE|1|XA|U|2618
6ZSE|1|XA|A|2619
6ZSE|1|XA|G|2620

Current chains

Chain XA

16S rRNA

Nearby chains

Chain AA

Small subunit ribosomal RNA; SSU rRNA

Chain XL

39S ribosomal protein L14, mitochondrial