HL_6ZSE_046
3D structure
- PDB id
- 6ZSE (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human mitochondrial ribosome in complex with mRNA, A/P-tRNA and P/E-tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 5 Å
Loop
- Sequence
- GUGAAGAGGC
- Length
- 10 nucleotides
- Bulged bases
- 6ZSE|1|XA|A|2693, 6ZSE|1|XA|A|2694, 6ZSE|1|XA|G|2695, 6ZSE|1|XA|G|2697, 6ZSE|1|XA|G|2698
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6ZSE_046 not in the Motif Atlas
- Homologous match to HL_7RQB_050
- Geometric discrepancy: 0.1369
- The information below is about HL_7RQB_050
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_90642.6
- Basepair signature
- cWW-tWH-F-F-F
- Number of instances in this motif group
- 6
Unit IDs
6ZSE|1|XA|G|2690
6ZSE|1|XA|U|2691
6ZSE|1|XA|G|2692
6ZSE|1|XA|A|2693
6ZSE|1|XA|A|2694
6ZSE|1|XA|G|2695
6ZSE|1|XA|A|2696
6ZSE|1|XA|G|2697
6ZSE|1|XA|G|2698
6ZSE|1|XA|C|2699
Current chains
- Chain XA
- 16S rRNA
Nearby chains
- Chain 0
- 39S ribosomal protein L32, mitochondrial
- Chain XE
- 39S ribosomal protein L3, mitochondrial
- Chain XS
- 39S ribosomal protein L21, mitochondrial
- Chain o
- Ribosomal protein 63, mitochondrial
- Chain r
- 39S ribosomal protein S18a, mitochondrial
Coloring options: