HL_6ZSE_048

3D structure

PDB id

6ZSE (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human mitochondrial ribosome in complex with mRNA, A/P-tRNA and P/E-tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

5 Å

Loop

Sequence

UUGGGGCGA

Length

9 nucleotides

Bulged bases

6ZSE|1|XA|G|2814

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6ZSE_048 not in the Motif Atlas

Homologous match to HL_7A0S_052

Geometric discrepancy: 0.1351

The information below is about HL_7A0S_052

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_11974.2

Basepair signature

cWW-F-F-F-F-F-F

Number of instances in this motif group

17

Unit IDs

6ZSE|1|XA|U|2812
6ZSE|1|XA|U|2813
6ZSE|1|XA|G|2814
6ZSE|1|XA|G|2815
6ZSE|1|XA|G|2816
6ZSE|1|XA|G|2817
6ZSE|1|XA|C|2818
6ZSE|1|XA|G|2819
6ZSE|1|XA|A|2820

Current chains

Chain XA

16S rRNA

Nearby chains

Chain XN

39S ribosomal protein L16, mitochondrial

Chain XW

39S ribosomal protein L27, mitochondrial