HL_6ZSG_008

3D structure

PDB id

6ZSG (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human mitochondrial ribosome in complex with mRNA, A-site tRNA, P-site tRNA and E-site tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

4 Å

Loop

Sequence

UUGUAAAAAA

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6ZSG_008 not in the Motif Atlas

Geometric match to HL_4LFB_015

Geometric discrepancy: 0.2564

The information below is about HL_4LFB_015

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_38491.3

Basepair signature

cWW-F-F-F-F-F-F-F-F

Number of instances in this motif group

14

Unit IDs

6ZSG|1|AA|U|989
6ZSG|1|AA|U|990
6ZSG|1|AA|G|991
6ZSG|1|AA|U|992
6ZSG|1|AA|A|993
6ZSG|1|AA|A|994
6ZSG|1|AA|A|995
6ZSG|1|AA|A|996
6ZSG|1|AA|A|997
6ZSG|1|AA|A|998

Current chains

Chain AA

12S rRNA

Nearby chains

Chain AF

28S ribosomal protein S7, mitochondrial

Chain AI

28S ribosomal protein S11, mitochondrial

Chain AQ

28S ribosomal protein S21, mitochondrial