HL_6ZTJ_063
3D structure
- PDB id
- 6ZTJ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli 70S-RNAP expressome complex in NusG-coupled state (38 nt intervening mRNA)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.4 Å
Loop
- Sequence
- CAUCCCG
- Length
- 7 nucleotides
- Bulged bases
- 6ZTJ|1|BA|A|886, 6ZTJ|1|BA|C|889, 6ZTJ|1|BA|C|890
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6ZTJ_063 not in the Motif Atlas
- Geometric match to HL_2Y8W_001
- Geometric discrepancy: 0.3546
- The information below is about HL_2Y8W_001
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_40612.1
- Basepair signature
- cWW
- Number of instances in this motif group
- 3
Unit IDs
6ZTJ|1|BA|C|885
6ZTJ|1|BA|A|886
6ZTJ|1|BA|U|887
6ZTJ|1|BA|C|888
6ZTJ|1|BA|C|889
6ZTJ|1|BA|C|890
6ZTJ|1|BA|G|891
Current chains
- Chain BA
- 23S ribosomal RNA
Nearby chains
- Chain AM
- 30S ribosomal protein S13
- Chain AS
- 30S ribosomal protein S19
Coloring options: