HL_6ZTJ_092

3D structure

PDB id

6ZTJ (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S-RNAP expressome complex in NusG-coupled state (38 nt intervening mRNA)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

CUAAAGAGUAACG

Length

13 nucleotides

Bulged bases

6ZTJ|1|BA|A|2268, 6ZTJ|1|BA|C|2275

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6ZTJ_092 not in the Motif Atlas

Homologous match to HL_5J7L_187

Geometric discrepancy: 0.0598

The information below is about HL_5J7L_187

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_91939.2

Basepair signature

cWW-tSH-tHH-tWW-F-F-F

Number of instances in this motif group

8

Unit IDs

6ZTJ|1|BA|C|2264
6ZTJ|1|BA|U|2265
6ZTJ|1|BA|A|2266
6ZTJ|1|BA|A|2267
6ZTJ|1|BA|A|2268
6ZTJ|1|BA|G|2269
6ZTJ|1|BA|A|2270
6ZTJ|1|BA|G|2271
6ZTJ|1|BA|U|2272
6ZTJ|1|BA|A|2273
6ZTJ|1|BA|A|2274
6ZTJ|1|BA|C|2275
6ZTJ|1|BA|G|2276

Current chains

Chain BA

23S ribosomal RNA

Nearby chains

Chain BB

5S ribosomal RNA; 5S rRNA

Chain BN

50S ribosomal protein L16

Chain BX

50S ribosomal protein L27