HL_6ZTJ_098
3D structure
- PDB id
- 6ZTJ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli 70S-RNAP expressome complex in NusG-coupled state (38 nt intervening mRNA)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.4 Å
Loop
- Sequence
- AGUUCAUAU
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6ZTJ_098 not in the Motif Atlas
- Homologous match to HL_4WF9_056
- Geometric discrepancy: 0.1529
- The information below is about HL_4WF9_056
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_52011.1
- Basepair signature
- cWW-tSH-F-F-F-F-F
- Number of instances in this motif group
- 9
Unit IDs
6ZTJ|1|BA|A|2471
6ZTJ|1|BA|G|2472
6ZTJ|1|BA|U|2473
6ZTJ|1|BA|U|2474
6ZTJ|1|BA|C|2475
6ZTJ|1|BA|A|2476
6ZTJ|1|BA|U|2477
6ZTJ|1|BA|A|2478
6ZTJ|1|BA|U|2479
Current chains
- Chain BA
- 23S ribosomal RNA
Nearby chains
- Chain AX
- Transfer RNA; tRNA
- Chain B6
- 50S ribosomal protein L36
- Chain BG
- 50S ribosomal protein L6
- Chain BN
- 50S ribosomal protein L16
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