HL_6ZTL_091

3D structure

PDB id

6ZTL (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S-RNAP expressome complex in collided state bound to NusG

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

CUAAAGAGUAACG

Length

13 nucleotides

Bulged bases

6ZTL|1|BA|A|2268, 6ZTL|1|BA|C|2275

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6ZTL_091 not in the Motif Atlas

Homologous match to HL_7RQB_054

Geometric discrepancy: 0.0866

The information below is about HL_7RQB_054

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_19870.6

Basepair signature

cWW-tSH-tHH-tWW-F-F-F

Number of instances in this motif group

7

Unit IDs

6ZTL|1|BA|C|2264
6ZTL|1|BA|U|2265
6ZTL|1|BA|A|2266
6ZTL|1|BA|A|2267
6ZTL|1|BA|A|2268
6ZTL|1|BA|G|2269
6ZTL|1|BA|A|2270
6ZTL|1|BA|G|2271
6ZTL|1|BA|U|2272
6ZTL|1|BA|A|2273
6ZTL|1|BA|A|2274
6ZTL|1|BA|C|2275
6ZTL|1|BA|G|2276

Current chains

Chain BA

23S ribosomal RNA

Nearby chains

Chain BN

50S ribosomal protein L16

Chain BX

50S ribosomal protein L27