HL_6ZTM_018

3D structure

PDB id

6ZTM (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S-RNAP expressome complex in collided state without NusG

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

CCUUGAG

Length

7 nucleotides

Bulged bases

6ZTM|1|AA|U|843

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6ZTM_018 not in the Motif Atlas

Geometric match to HL_8C3A_022

Geometric discrepancy: 0.3471

The information below is about HL_8C3A_022

Detailed Annotation

Externally structured

Broad Annotation

Externally structured

Motif group

HL_96426.1

Basepair signature

cWW-F

Number of instances in this motif group

4

Unit IDs

6ZTM|1|AA|C|840
6ZTM|1|AA|C|841
6ZTM|1|AA|U|842
6ZTM|1|AA|U|843
6ZTM|1|AA|G|844
6ZTM|1|AA|A|845
6ZTM|1|AA|G|846

Current chains

Chain AA

16S ribosomal RNA

Nearby chains

Chain AR

30S ribosomal protein S18