HL_6ZTM_098

3D structure

PDB id

6ZTM (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S-RNAP expressome complex in collided state without NusG

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

UGAAGUAG

Length

8 nucleotides

Bulged bases

6ZTM|1|BA|G|2529

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6ZTM_098 not in the Motif Atlas

Homologous match to HL_5J7L_194

Geometric discrepancy: 0.0826

The information below is about HL_5J7L_194

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_31585.4

Basepair signature

cWW-F-F-F-F-F

Number of instances in this motif group

20

Unit IDs

6ZTM|1|BA|U|2528
6ZTM|1|BA|G|2529
6ZTM|1|BA|A|2530
6ZTM|1|BA|A|2531
6ZTM|1|BA|G|2532
6ZTM|1|BA|U|2533
6ZTM|1|BA|A|2534
6ZTM|1|BA|G|2535

Current chains

Chain BA

23S ribosomal RNA

Nearby chains

Chain B6

50S ribosomal protein L36

Chain BG

50S ribosomal protein L6