HL_6ZTM_101

3D structure

PDB id

6ZTM (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S-RNAP expressome complex in collided state without NusG

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

CGAGAG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6ZTM_101 not in the Motif Atlas

Geometric match to HL_1MZP_001

Geometric discrepancy: 0.0795

The information below is about HL_1MZP_001

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_34789.1

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

335

Unit IDs

6ZTM|1|BA|C|2658
6ZTM|1|BA|G|2659
6ZTM|1|BA|A|2660
6ZTM|1|BA|G|2661
6ZTM|1|BA|A|2662
6ZTM|1|BA|G|2663

Current chains

Chain BA

23S ribosomal RNA

Nearby chains

Chain BG

50S ribosomal protein L6