HL_6ZTM_110
3D structure
- PDB id
- 6ZTM (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli 70S-RNAP expressome complex in collided state without NusG
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.3 Å
Loop
- Sequence
- A(PSU)UGAA(MIA)A(PSU)
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Modified nucleotides: PSU, MIA
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6ZTM_110 not in the Motif Atlas
- Homologous match to HL_5J8B_118
- Geometric discrepancy: 0.2001
- The information below is about HL_5J8B_118
- Detailed Annotation
- tRNA anticodon loop
- Broad Annotation
- Anticodon loop
- Motif group
- HL_06059.4
- Basepair signature
- cWW-F-F-F-F-F-F-F
- Number of instances in this motif group
- 54
Unit IDs
6ZTM|1|AX|A|31
6ZTM|1|AX|PSU|32
6ZTM|1|AX|U|33
6ZTM|1|AX|G|34
6ZTM|1|AX|A|35
6ZTM|1|AX|A|36
6ZTM|1|AX|MIA|37
6ZTM|1|AX|A|38
6ZTM|1|AX|PSU|39
Current chains
- Chain AX
- Phe-NH-tRNA(Phe) A-site
Nearby chains
- Chain AA
- Small subunit ribosomal RNA; SSU rRNA
- Chain AL
- 30S ribosomal protein S12
- Chain AV
- mRNA
- Chain BA
- Large subunit ribosomal RNA; LSU rRNA
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